Banner

Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs2872379 chr2:132188368 A/G LOC150776 chr2:132250386-132279149:+ 0.52 6.4 4.5E-8 Box Plot
ACC rs28783479 chr14:64392010 A/G SYNE2 chr14:64319701-64693151:+ 1.03 5.3 2.41E-6 Box Plot
ACC rs28793692 chr16:50382559 C/T CYLD chr16:50775961-50835846:+ 0.58 5.32 2.21E-6 Box Plot
ACC rs28835689 chr7:64464998 A/C INTS4L1 chr7:64601603-64694600:+ 0.71 5.2 3.36E-6 Box Plot
ACC rs28872832 chr7:64486813 C/T INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs2903762 chr11:60131653 A/T MS4A14 chr11:60146003-60185229:+ 0.34 5.29 2.49E-6 Box Plot
ACC rs2910686 chr5:96252589 T/C ERAP2 chr5:96211643-96255420:+ 1 11.99 1.38E-16 Box Plot
ACC rs2910687 chr5:96276877 C/T ERAP2 chr5:96211643-96255420:+ 0.94 11.24 1.6E-15 Box Plot
ACC rs2910688 chr5:96251701 T/C ERAP2 chr5:96211643-96255420:+ 0.86 9.07 2.73E-12 Box Plot
ACC rs2910788 chr5:96274720 G/T ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2910789 chr5:96276395 G/C ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2910792 chr5:96276386 A/G ERAP2 chr5:96211643-96255420:+ 0.95 10.88 5.25E-15 Box Plot
ACC rs2927608 chr5:96252432 G/A ERAP2 chr5:96211643-96255420:+ 1 11.99 1.38E-16 Box Plot
ACC rs2927609 chr5:96252079 G/A ERAP2 chr5:96211643-96255420:+ 0.98 12.02 1.24E-16 Box Plot
ACC rs2931623 chr1:245197611 A/G EFCAB2 chr1:245133007-245290466:+ 0.69 6.24 8.01E-8 Box Plot